Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910295.1_cds_XP_016460350.1_53779
CDS Infomation

[gene=LOC107783840] [db_xref=GeneID:107783840] [protein=argininosuccinate lyase, chloroplastic] [protein_id=XP_016460350.1] [location=join(14968..15312,16545..16808,17046..17162,17969..18117,18821..19112,19310..19474,20059..20316)] [gbkey=CDS]
Sequence

ATGGAGTCACTGTTAGTCTCTTCCTCAACCTCTTTGTCAATCTCCGCCACCATTTTCTCT
CCATCCAAACACGCCCTAATTCTTCCTAAACCCCAAAACCTCTCCTTCTCTTCCCCTAAC
TCCACTGCTCGCCTAGCATTGCTCACCTGCGCCGCGCAGCAGATGAGCAACTCTCCACCA
CCCTCTACGGCGGCTGCAAAGGAGGTGAAATTATGGGGCGGCCGTTTCGAGGAGAGTGTT
ACAGATGCCGTTGAGAAGTTCACTGAGTCCATTTCTTTTGATAAGGCTCTTTATAAACAG
GATATTATGGGTAGTAAAGCTCACGCCTCTATGCTCGCTAAACAGGGATTGATGAGTGAT
AGTGATAGAGATACTATCCTAAAAGGTCTTGAAGAGATAGAGAGGCAAATAGAGGCAGGT
GAATTCTTATGGAGGACGGATAGAGAGGATGTGCATATGAACATTGAAGCAGCGCTTACT
GATTTAGTTGGTGAACCTGCCAAAAAGCTACATACTGCCAGGAGTAGAAACGATCAAGTT
GCTACTGACTTTCGCTTGTGGTGCCGTGATGCTATTGACAGCATCATTTCACGCATTAGG
AATCTTCAGACGGCACTGGTTATACTAGCTCTTCAGAATGAGGGTCTTATTGTTCCTGGA
TATACTCATCTGCAAAGGGCACAACCTGTTCTGTTGCAACACCTTCTCTTAGCATACGTT
GAACAGCTTGAGCGTGACGCTGGCCGCTTGTTAGATTGTAGAGCAAGGCTGAATTTCTGC
CCTCTAGGTGCATGTGCATTAGCTGGCACTGGTCTTCCCATTGATAGGTTTATGACTTCT
GATTCATTGGGGTTCGCTGCGCCAATGAGGAACAGCATTGATGCAGTTTCAGATCGAGAT
TTTGTGCTGGAGCTTCTTTCTGCTAATTCCATCACTGCCGTCCATCTCTCTCGCCTGGGC
GAAGAATGGGTATTATGGGCATCTGAAGAATTTGGCTTCTTGACCCCTAGTGATTCTGTT
TCCACTGGAAGCAGTATAATGCCTCAAAAGAAGAACCCAGACCCAATGGAGCTTGTTCGT
GGAAAATCTGCTAGAGTCATAGGGGACTTAGTTACACTTCTTGTGTTGTGCAAGGGACTT
CCTCATGCGTACAACCGGGATTTGCAGGAAGATAAGGAGCCCGTATTTGACAGTGTCAAG
ACAATAGTTGGGATGCTTGAGGTCTCAGCAGAGTTTGCACAGAATGTTGCCTTTAACCGA
GAGAGAATACAAAAGGCTCTACCGGCTGGTCATCTTGATGCCACTACCCTAGCTGATTAC
CTTGTGAAAAAGGGAATACCTTTCAGAACTTCTCATGACATAGTTGGGAGGTCTGTCGCT
TTGTGTGTTTCCAGAAACTGCGAGCTTCAAGACCTTAGCCTTGACGAGTTGAACAGTCTA
AGTCCGGTATTTGACAAGGATGTCTACGAGTTTCTGGGGGTTGAAAATTCAATAAAGAAA
TTCAGATCATATGGCTCCACTGGTTCAGAATGTGTTGCTGGTCAGCTTGATTACTGGATT
GATAAGCTTAATATCAGCAGAGAAAGGTAA

Peptide Sequence

PEP ID

XP_016460350.1
PEP Infomation

PREDICTED: argininosuccinate lyase, chloroplastic [Nicotiana tabacum]
Sequence

MESLLVSSSTSLSISATIFSPSKHALILPKPQNLSFSSPNSTARLALLTCAAQQMSNSPP
PSTAAAKEVKLWGGRFEESVTDAVEKFTESISFDKALYKQDIMGSKAHASMLAKQGLMSD
SDRDTILKGLEEIERQIEAGEFLWRTDREDVHMNIEAALTDLVGEPAKKLHTARSRNDQV
ATDFRLWCRDAIDSIISRIRNLQTALVILALQNEGLIVPGYTHLQRAQPVLLQHLLLAYV
EQLERDAGRLLDCRARLNFCPLGACALAGTGLPIDRFMTSDSLGFAAPMRNSIDAVSDRD
FVLELLSANSITAVHLSRLGEEWVLWASEEFGFLTPSDSVSTGSSIMPQKKNPDPMELVR
GKSARVIGDLVTLLVLCKGLPHAYNRDLQEDKEPVFDSVKTIVGMLEVSAEFAQNVAFNR
ERIQKALPAGHLDATTLADYLVKKGIPFRTSHDIVGRSVALCVSRNCELQDLSLDELNSL
SPVFDKDVYEFLGVENSIKKFRSYGSTGSECVAGQLDYWIDKLNISRER

Transcript Sequence

Gene sequence data has not been registered.